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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945544.1_cds_XP_016488013.1_78692
CDS Infomation

[gene=LOC107808047] [db_xref=GeneID:107808047] [protein=laccase-17-like] [protein_id=XP_016488013.1] [location=complement(join(15264..15394,15495..16451,16726..16854,16935..17179,17450..17601,17979..18071))] [gbkey=CDS]
Sequence

ATGGGCGCTATTGGAATATGTCTTGTCTCTCTCATTACATCATGTCTCCTGATCCATAGC
GTTTCAGCTACAACAAGGCATTATAAATTTGAAATCAAAATGCAAAATGTTACAAGATTA
TGCCACACCAAGAGTATGGTGACAGTGAATGGACAATTCCCTGGACCTAAAGTTGTGGCA
AGGGAAGGTGATCGTCTTGAAATTGAGGTGCTCAATCATGTTCAGAACAACATCTCTATC
CATTGGCATGGAATTAGACAGCTTCGTAGTGGATGGGCAGATGGACCAGCATATATAACA
CAATGTCCCATTCAAACTGGTCAGAGTTATGTCTATAACTTCACTATAATTGGCCAAAGA
GGAACATTTTGGTGGCATGCACATATTTCATGGTTGAGATCAACTGTTTATGGTCCTATA
ATTATTCTTCCAAAGAAAAATACTCCTTATCCATTTGCCAAACCCTACAAAGAAGTTCCC
ATCATCTTTGGCGAATGGTTCAATGCAGACACTGAGGCTATAATTGCCCAAGCTTTACAA
ACAGGTGGAGGTCCTAATGTTTCTGATGCCTATACTATCAATGGACTTCCTGGCCCTTTG
TATAATTGTTCAGCCAAAGATACTTTTAAGCTGAAGGTGAAACCTGGAAAGACTTATCTT
CTTCGATTGATCAATGCTGCACTTAATGATGAGCTTTTCTTCAGCATTGCGAATCATACT
CTTCGAGTTATCGATGCTGATGGCGTTTATGTTAAACCCTTTGAGACAGACACACTTATT
ATTACTCCAGGACAAACTCACAATGTTCTTCTCAAAACTAAACCTCATTTTCCTAATGCC
ACATTTTACATGACCGCTCGGCCATATGTGACAGGTCCTGGCACATTTGACAACTCTACA
GTTGCTGGAATTTTAGAGTATGAATCAAAATCAAGACCCCATTTGAAAAACCTACCACTT
TTTAAGCCATTACTACCAGCTCTCAATGACACCACTTTTGTCACCAATTTTACGAGTAGA
TTAAGAAGTCTTGCTACTCCTCATTTCCCTGCTAATGTACCTCTAAACGTCGATAAACAT
TTATTTTTCACAGTAGGTCTTGGAACAAGTCCTTGTGATCAAAACAAAACTTGCCAAGGA
CCAAATGGCACAAAATTCTCAGCTTCAGTTAACAATATATCATTTGTTCAACCTACAACT
GCACTTCTCCAATCTCATTTCTTAGGACAATCCAAGGGTGTATACAAGCCTGATTTTCCT
TATAGTCCTTTAAATTGGTTTAACTACACTGGGAACCCTCCAAATAACACCTTAGTTAAG
AATGATACAAAACTTATGGTTTTGCCATTTAACACGAGCGTGGAGTTAGTGATGCAAGAC
ACAAGTATTCTTGGTGCTGAAAGTCACCCTCTTCATCTTCATGGATTTAACTTCTTTGTT
GTTGGCCAAGGGTTTGGGAATTTTGACGGCAATAAGGATCCAGCAAATTTCAACCTTGCT
GATCCTATTGAGAGGAATACTGTAGGTGTCCCTTCTGGTGGTTGGGTTGCTATTCGATTT
CTAGCAGACAATCCAGGAGTATGGTTTATGCATTGTCACCTGGAAGTTCATACAAGTTGG
GGATTGAAAATGGCATGGTTGGTTCTCGATGGAAAACTTCCTAATCAGAAGCTACCTCTT
CCCCCAAGAGACCTCCCCAAGTGTTGA

Peptide Sequence

PEP ID

XP_016488013.1
PEP Infomation

PREDICTED: laccase-17-like [Nicotiana tabacum]
Sequence

MGAIGICLVSLITSCLLIHSVSATTRHYKFEIKMQNVTRLCHTKSMVTVNGQFPGPKVVA
REGDRLEIEVLNHVQNNISIHWHGIRQLRSGWADGPAYITQCPIQTGQSYVYNFTIIGQR
GTFWWHAHISWLRSTVYGPIIILPKKNTPYPFAKPYKEVPIIFGEWFNADTEAIIAQALQ
TGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRLINAALNDELFFSIANHT
LRVIDADGVYVKPFETDTLIITPGQTHNVLLKTKPHFPNATFYMTARPYVTGPGTFDNST
VAGILEYESKSRPHLKNLPLFKPLLPALNDTTFVTNFTSRLRSLATPHFPANVPLNVDKH
LFFTVGLGTSPCDQNKTCQGPNGTKFSASVNNISFVQPTTALLQSHFLGQSKGVYKPDFP
YSPLNWFNYTGNPPNNTLVKNDTKLMVLPFNTSVELVMQDTSILGAESHPLHLHGFNFFV
VGQGFGNFDGNKDPANFNLADPIERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSW
GLKMAWLVLDGKLPNQKLPLPPRDLPKC

Transcript Sequence

Gene sequence data has not been registered.